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| molecular microbial ecology manual: Molecular Microbial Ecology Manual A.D. Akkermans, Jan Dirk van Elsas, F.J. de Bruijn, 2012-12-06 For a long time microbial ecology has been developed as a distinct field with in Ecology. In spite of the important role of microorganisms in the environ ment, this group of 'invisible' organisms remained unaccessable to other ecologists. Detection and identification of microorganisms remain largely dependent on isolation techniques and characterisation of pure cultures. We now realise that only a minor fraction of the microbial community can be cultivated. As a result of the introduction of molecular methods, microbes can now be detected and identified at the DNA/RNA level in their natural environment. This has opened a new field in ecology: Molecular Microbial Ecology. In the present manual we aim to introduce the microbial ecologist to a selected number of current molecular techniques that are relevant in micro bial ecology. The first edition of the manual contains 33 chapters and an equal number of additional chapters will be added this year. Since the field of molecular ecology is in a continuous progress, we aim to update and extend the Manual regularly and will invite anyone to deposit their new protocols in full detail in the next edition of this Manual. |
| molecular microbial ecology manual: Molecular microbial ecology manual , 2004 |
| molecular microbial ecology manual: Molecular microbial ecology manual , 2004 |
| molecular microbial ecology manual: Methods in Gut Microbial Ecology for Ruminants Harinder P.S. Makkar, Christopher S. McSweeney, 2006-02-23 Asaresultofvarioushumanactivities,suchasincreaseinhumanpopulation,decrease in arable land due to soil degradation, urbanization, industrialization and associated increase in the demand for livestock products, dramatic changes are occurring in the global ruminant livestock sector. These changes includeshift inthesize of regional livestock populations and in the types of management and feeding systems under which ruminant livestock are held, and increased demand of a wider range of quality attributes from animal agriculture, not just of the products themselves but also of the methods used in their production. The livestock sector will need to respond to newchallengesofincreasinglivestockproductivitywhileprotectingenvironmentand human health and conservingbiodiversity and natural resources. The micro-organisms in the digestive tracts of ruminant livestock have a profound in?uence on the conversion offeedinto end products, which can impact on the- imal and theenvironment. As the livestock sector grows particularly in developing countries, there will be an increasing need to understand these processes for b- ter management and use ofbothfeed and other natural resources that underpinthe development of sustainable feeding systems. |
| molecular microbial ecology manual: Molecular Microbial Ecology Manual , 2004 |
| molecular microbial ecology manual: Handbook of Molecular Microbial Ecology I Frans J. de Bruijn, 2011-10-14 The premiere two-volume reference on revelations from studying complex microbial communities in many distinct habitats Metagenomics is an emerging field that has changed the way microbiologists study microorganisms. It involves the genomic analysis of microorganisms by extraction and cloning of DNA from a group of microorganisms, or the direct use of the purified DNA or RNA for sequencing, which allows scientists to bypass the usual protocol of isolating and culturing individual microbial species. This method is now used in laboratories across the globe to study microorganism diversity and for isolating novel medical and industrial compounds. Handbook of Molecular Microbial Ecology is the first comprehensive two-volume reference to cover unculturable microorganisms in a large variety of habitats, which could not previously have been analyzed without metagenomic methodology. It features review articles as well as a large number of case studies, based largely on original publications and written by international experts. This first volume, Metagenomics and Complementary Approaches, covers such topics as: Background information on DNA reassociation and use of 16 rRNA and other DNA fingerprinting approaches Species designation in microbiology Metagenomics: Introduction to the basic tools with examples Consortia and databases Bioinformatics Computer-assisted analysis Complementary approaches—microarrays, metatranscriptomics, metaproteomics, metabolomics, and single cell analysis A special feature of this volume is the highlighting of the databases and computer programs used in each study; they are listed along with their sites in order to facilitate the computer-assisted analysis of the vast amount of data generated by metagenomic studies. Handbook of Molecular Microbial Ecology I is an invaluable reference for researchers in metagenomics, microbiology, and environmental microbiology; those working on the Human Microbiome Project; microbial geneticists; molecular microbial ecologists; and professionals in molecular microbiology and bioinformatics. |
| molecular microbial ecology manual: Manual of Environmental Microbiology Cindy H. Nakatsu, Robert V. Miller, Suresh D. Pillai, 2020-08-11 The single most comprehensive resource for environmental microbiology Environmental microbiology, the study of the roles that microbes play in all planetary environments, is one of the most important areas of scientific research. The Manual of Environmental Microbiology, Fourth Edition, provides comprehensive coverage of this critical and growing field. Thoroughly updated and revised, the Manual is the definitive reference for information on microbes in air, water, and soil and their impact on human health and welfare. Written in accessible, clear prose, the manual covers four broad areas: general methodologies, environmental public health microbiology, microbial ecology, and biodegradation and biotransformation. This wealth of information is divided into 18 sections each containing chapters written by acknowledged topical experts from the international community. Specifically, this new edition of the Manual Contains completely new sections covering microbial risk assessment, quality control, and microbial source tracking Incorporates a summary of the latest methodologies used to study microorganisms in various environments Synthesizes the latest information on the assessment of microbial presence and microbial activity in natural and artificial environments The Manual of Environmental Microbiology is an essential reference for environmental microbiologists, microbial ecologists, and environmental engineers, as well as those interested in human diseases, water and wastewater treatment, and biotechnology. |
| molecular microbial ecology manual: Handbook of Methods in Aquatic Microbial Ecology Paul F. Kemp, Jonathan J. Cole, Barry F. Sherr, Evelyn B. Sherr, 2018-05-02 Handbook of Methods in Aquatic Microbial Ecology is the first comprehensive compilation of 85 fundamental methods in modern aquatic microbial ecology. Each method is presented in a detailed, step-by-step format that allows readers to adopt new methods with little difficulty. The methods represent the state of the art, and many have become standard procedures in microbial research and environmental assessment. The book also presents practical advice on how to apply the methods. It will be an indispensable reference for marine and freshwater research laboratories, environmental assessment laboratories, and industrial research labs concerned with microbial measurements in water. |
| molecular microbial ecology manual: Handbook of Molecular Microbial Ecology II Frans J. de Bruijn, 2011-10-14 The premiere two-volume reference on revelations from studying complex microbial communities in many distinct habitats Metagenomics is an emerging field that has changed the way microbiologists study microorganisms. It involves the genomic analysis of microorganisms by extraction and cloning of DNA from a group of microorganisms, or the direct use of the purified DNA or RNA for sequencing, which allows scientists to bypass the usual protocol of isolating and culturing individual microbial species. This method is now used in laboratories across the globe to study microorganism diversity and for isolating novel medical and industrial compounds. Handbook of Molecular Microbial Ecology is the first comprehensive two-volume reference to cover unculturable microorganisms in a large variety of habitats, which could not previously have been analyzed without metagenomic methodology. It features review articles as well as a large number of case studies, based largely on original publications and written by international experts. This second volume, Metagenomics in Different Habitats, covers such topics as: Viral genomes Metagenomics studies in a variety of habitats, including marine environments and lakes, soil, and human and animal digestive tracts Other habitats, including those involving microbiome diversity in human saliva and functional intestinal metagenomics; diversity of archaea in terrestrial hot springs; and microbial communities living at the surface of building stones Biodegradation Biocatalysts and natural products A special feature of this book is the highlighting of the databases and computer programs used in each study; they are listed along with their sites in order to facilitate the computer-assisted analysis of the vast amount of data generated by metagenomic studies. Such studies in a variety of habitats are described here, which present a large number of different system-dependent approaches in greatly differing habitats. Handbook of Molecular Microbial Ecology II is an invaluable reference for researchers in metagenomics, microbial ecology, microbiology, and environmental microbiology; those working on the Human Microbiome Project; microbial geneticists; and professionals in molecular microbiology and bioinformatics. |
| molecular microbial ecology manual: Molecular Microbial Ecology Manual Including Supplement 3 Antoon D.L. Akkermans, Jan Dirk van Elsas, Frans J. de Bruijn, 1998 This manual provides general information about molecular techniques relevant to molecular ecological research. Attention is paid to the use of molecular methods for studying the fate of genetically modified and native micro-organisms in the environment. |
| molecular microbial ecology manual: Molecular Microbial Ecology Manual: folletos: Contents , 2004 Section 1: Isolation of nucleic acids. Section 2: Detection of microbial nucleic acid sequences. Section 3: Identification and classification of microbes using DNA and RNA sequences. Section 4: Detection, identification and classification of microbes using other methods. Section 5: Detection of gene transfer in the environment. Section 6: Tracking of specific microbes in the environment. Section 7: Statistical, computer-assisted and other analyses. Section 8: Molecular tools to assess microbial activities. |
| molecular microbial ecology manual: Microbial Ecology Larry L. Barton, Diana E. Northup, 2011-10-14 This book covers the ecological activities of microbes in the biosphere with an emphasis on microbial interactions within their environments and communities In thirteen concise and timely chapters, Microbial Ecology presents a broad overview of this rapidly growing field, explaining the basic principles in an easy-to-follow manner. Using an integrative approach, it comprehensively covers traditional issues in ecology as well as cutting-edge content at the intersection of ecology, microbiology, environmental science and engineering, and molecular biology. Examining the microbial characteristics that enable microbes to grow in different environments, the book provides insights into relevant methodologies for characterization of microorganisms in the environment. The authors draw upon their extensive experience in teaching microbiology to address the latest hot-button topics in the field, such as: Ecology of microorganisms in natural and engineered environments Advances in molecular-based understanding of microbial phylogeny and interactions Microbially driven biogeochemical processes and interactions among microbial populations and communities Microbial activities in extreme or unusual environments Ecological studies pertaining to animal, plant, and insect microbiology Microbial processes and interactions associated with environmental pollution Designed for use in teaching, Microbial Ecology offers numerous special features to aid both students and instructors, including: Information boxes that highlight key microbial ecology issues Microbial Spotlights that focus on how prominent microbial ecologists became interested in microbial ecology Examples that illustrate the role of bacterial interaction with humans Exercises to promote critical thinking Selected reading lists Chapter summaries and review questions for class discussion Various microbial interactions and community structures are presented through examples and illustrations. Also included are mini case studies that address activities of microorganisms in specific environments, as well as a glossary and key words. All these features make this an ideal textbook for graduate or upper-level undergraduate students in biology, microbiology, ecology, or environmental science. It also serves as a highly useful reference for scientists and environmental professionals. |
| molecular microbial ecology manual: Molecular Microbial Ecology Manual Antoon D. L. Akkermans, Frans J. de Bruijn, Jan Dirk van Elsas, 1996 |
| molecular microbial ecology manual: Microbial Ecology of Activated Sludge Robert Seviour, Per Halkjaer Nielsen, 2010-01-15 Microbial Ecology of Activated Sludge, written for both microbiologists and engineers, critically reviews our current understanding of the microbiology of activated sludge, the most commonly used process for treating both domestic and industrial wastes. The contributors are all internationally recognized as leading research workers in activated sludge microbiology, and all have made valuable contributions to our present understanding of the process. The book pays particular attention to how the application of molecular methods has changed our perceptions of the identity of the filamentous bacteria causing the operational disorders of bulking and foaming, and the bacteria responsible for nitrification and denitrification and phosphorus accumulation in nutrient removal processes. Special attention is given to how it is now becoming possible to relate the composition of the community of microbes present in activated sludge, and the in situ function of individual populations there, and how such information might be used to manage and control these systems better. Detailed descriptions of some of these molecular methods are provided to allow newcomers to this field of study an opportunity to apply them in their research. Comprehensive descriptions of organisms of interest and importance are also given, together with high quality photos of activated sludge microbes. Activated sludge processes have been used globally for nearly 100 years, and yet we still know very little of how they work. In the past 15 years the advent of molecular culture independent methods of study have provided tools enabling microbiologists to understand which organisms are present in activated sludge, and critically, what they might be doing there. Microbial Ecology of Activated Sludge will be the first book available to deal comprehensively with the very exciting new information from applying these methods, and their impact on how we now view microbiologically mediated processes taking place there. As such it will be essential reading for microbial ecologists, environmental biotechnologists and engineers involved in designing and managing these plants. It will also be suitable for postgraduate students working in this field. |
| molecular microbial ecology manual: Marine Microbiology John Paul, 2001-05-08 Written by experts in the field, Marine Microbiology presents the latest experimental techniques in the detail required for modern environmental microbiological research. Chapters start with the introduction and background of a particular method, followed by a concise description of the procedures involved. There is also a list of vendors who supply critical components which includes names, addresses, and websites at the end of each chapter. Covers both established and novel current methods Historical perspective Enumeration of autotrophic picoplankton, bacteria and viruses Fingerprinting Viral Assemblages by Pulsed Field Gel electrophoresis (PFGE) Fluorescence in situ hybridization with rRNA-targeted oligonucleotide probes Detection of phytoplankton by remote sensing Marine pollution microbiology Microbes in extreme environments List of suppliers provided at end of each chapter Colour plate section |
| molecular microbial ecology manual: Manual of Environmental Microbiology Christon J. Hurst, Ronald L. Crawford, Jay L. Garland, David A. Lipson, 2007-05-14 The most definitive manual of microbes in air, water, and soil and their impact on human health and welfare. • Incorporates a summary of the latest methodology used to study the activity and fate of microorganisms in various environments. • Synthesizes the latest information on the assessment of microbial presence and microbial activity in natural and artificial environments. • Features a section on biotransformation and biodegradation. • Serves as an indispensable reference for environmental microbiologists, microbial ecologists, and environmental engineers, as well as those interested in human diseases, water and wastewater treatment, and biotechnology. |
| molecular microbial ecology manual: Geomicrobiology Jillian F. Banfield, Kenneth H. Nealson, 2018-12-17 Volume 35 of Reviews in Mineralogy defines and explore the topic of geomicrobiology. It is organized so as to first introduce the nature, diversity, and metabolic impact of microorganisms and the types of solid phases they interact with. This is followed by a discussion of processes that occur at cell surfaces, interfaces between microbes and minerals, and within cells, and the resulting mineral precipitation, dissolution, and changes in aqueous geochemistry. The volume concludes with a discussion of the carbon cycle over geologic time. Basis for this volume was the Short Course on Geomicrobiology presented by the Mineralogical Society of America on October 18 and 19, 1997, at the Alta Peruvian Lodge in Alta, Utah. |
| molecular microbial ecology manual: Advances in PGPR Research Harikesh Bahadur Singh, Birinchi K Sarma, Chetan Keswani, 2017-11-24 Rhizosphere biology is approaching a century of investigations wherein growth-promoting rhizomicroorganisms (PGPR) have attracted special attention for their ability to enhance productivity, profitability and sustainability at a time when food security and rural livelihood are a key priority. Bio-inputs - either directly in the form of microbes or their by-products - are gaining tremendous momentum and harnessing the potential of agriculturally important microorganisms could help in providing low-cost and environmentally safe technologies to farmers. One approach to such biologically-based strategies is the use of naturally occurring products such as PGPR. Written by an international team of experts, this book considers new concepts and global issues in biopesticide research and evaluates the implications for sustainable productivity. It is an invaluable resource for researchers in applied agricultural biotechnology, microbiology and soil science, and also for industry personnel in these areas. |
| molecular microbial ecology manual: Nominations for the Office of Science and Technology Policy and the National Oceanographic and Atmospheric Administration United States. Congress. Senate. Committee on Commerce, Science, and Transportation, 2014 |
| molecular microbial ecology manual: Biological Nitrogen Fixation for the 21st Century Claudine Elmerich, Adam Kondorosi, William E. Newton, 2013-12-01 Nitrogen availability is one of the most critical factors that limits plant productivity. The largest reservoir of nitrogen is the atmosphere, but this gaseous molecular nitrogen only becomes available to plants through the biological nitrogen fixation process, which only prokaryotic cells have developed. The discovery that microbes were providing fixed nitrogen to legumes and the isolation of the first nitrogen-fixing bacteria occured at the end the 19th Century, in Louis Pasteur's time. We are now building on more than 100 years of research in this field and looking towards the 21st Century. The International Nitrogen Fixation Congress series Started more than 20 years ago. The format of this Congress is designed to gather scientists from very diverse origins, backgrounds, interests and scientific approaches and is a forum where fundamental knowledge is discussed alongside applied research. This confluence of perspectives is, we believe, extremely beneficial in raising new ideas, questions and concepts. |
| molecular microbial ecology manual: Applications of Gene-Based Technologies for Improving Animal Production and Health in Developing Countries Harinder P.S. Makkar, Gerrit J. Viljoen, 2005-08-12 Modern Biotechnology has potential for solving many problems associated with animal productivity and health and offers exciting opportunities for enhancing agricultural productivity. At present the focus is, however, on the issues and problems of significance for livestock producers in the developed world. In order to fully realize the benefits of this technology in developing countries, there is a need to identify, characterize and apply appropriate gene-based technologies for these regions. These proceedings present peer reviewed state-of-the-art papers describing the achievements in the areas of animal breeding and genetics, animal nutrition, animal health, and environment, ethics, safety, and regulatory aspects of gene-based technologies; achievements which could be realized using these modern scientific tools to maximise the benefits from the 'livestock revolution' that is taking place; and the constraints in the use of gene-based technologies and their specific research needs. This book will help in bridging the wide gap between developed and developing countries, in the development and use of gene-based technologies, and to elucidate the current and future roles of such technologies in the developing world. It is a good reference source for researchers, students and policy-makers alike. |
| molecular microbial ecology manual: Research on Nitrification and Related Processes, Part B , 2011-06-15 The global nitrogen cycle is the one most impacted by mankind. The past decade has changed our view on many aspects of the microbial biogeochemical cycles, including the global nitrogen cycle, which is mainly due to tremendous advances in methods, techniques and approaches. Many novel processes and the molecular inventory and organisms that facilitate them have been discovered only within the last 5 to 10 years, and the process is in progress. Research on Nitrification and Related Processes, Part B provides state-of-the-art updates on methods and protocols dealing with the detection, isolation and characterization of macromolecules and their hosting organisms that facilitate nitrification and related processes in the nitrogen cycle as well as the challenges of doing so in very diverse environments. - Provides state-of-the-art update on methods and protocols - Deals with the detection, isolation and characterization of macromolecules and their hosting organisms - Deals with the challenges of very diverse environments |
| molecular microbial ecology manual: Microbiological Methods for Assessing Soil Quality Jaap Bloem, David W. Hopkins, Anna Benedetti, 2005-12-20 This book provides a selection of microbiological methods which are applicable or already applied in regional or national soil quality monitoring programmes. An overview is given of approaches to monitoring, evaluating and managing soil quality (Part I), followed by a selection of methods which are described in sufficient detail to use the book as a practical handbook in the laboratory (Part II). Finally a census is given of the main methods used in over 30 European laboratories. The book is aimed at different levels: soil scientists, technicians, policy makers, land managers and students. |
| molecular microbial ecology manual: Handbook of Molecular Microbial Ecology I Frans J. De Bruijn, 2011 |
| molecular microbial ecology manual: The Microbiology of Activated Sludge Robert J. Seviour, L. Blackall, 2012-12-06 This book has been a long time in preparation. Initially it grew out of our frustrating attempts over the past ten years to identify the filamentous bacteria seen in large numbers in most activated sludge plants, and the realization that we know very little about them and the other microbial populations in these systems. Unfortunately this book does not provide many answers to the problems these filamentous bacteria can cause, but we hope it might encourage microbiologists and engineers to communi cate more with each other and to spend some time trying to understand the tax onomy, ecology and physiology of activated sludge microbes. It is now very timely, for example, to try to provide these filamentous bacteria with proper taxonomically valid names and to determine their correct place in bacterial classifications. This book is not meant to compete directly with the books by Gray (1989, 1990) nor the excellent manual published by Jenkins and coworkers (1993b), which has been invaluable to us and others trying to identify filamentous bacteria. Wanner's book (1994a) also provides an excellent account of the problems of bulking and foaming caused by filamentous bacteria. These publications and others by Eikelboom's group have made an enormous contribution to the study of filamentous bacteria, and will con tinue to do so. |
| molecular microbial ecology manual: Genomes and Genomics of Nitrogen-fixing Organisms Rafael Palacios, William E. Newton, 2005-02-15 Genomes and Genomics of Nitrogen-fixing Organisms This is Volume 3 of a seven-volume series on all aspects of Nitrogen Fixation. The series aims to be the definitive authority in the field and to act as a benchmark for some years to come. Rather than attempting to cram the whole field into a single volume, the subject matter is divided among seven volumes to allow authors the luxury of writing in depth with a comprehensive reference base. All authors are recognized practicing scientists in the area of their contribution, which ensures the high quality, relevance, and readability of the chapters. In establishing the rationale for, and the organization of, this book, we realized the need to divide it into two sections. The first section should be organism based and should review our current knowledge of the genomes of nitrogen-fixing organisms and what these nucleotide sequences tell us. The second section should then be technology based. It should review what technologies are available to mine the data inherent in the nucleotide sequences and how they are now being used to produce gene-function data from differential gene expression. |
| molecular microbial ecology manual: Journey to Diverse Microbial Worlds Joseph Seckbach, 2012-12-06 In this Journey to Microbial Worlds we present the diversity of microorganisms, from the state of fossil microbes in Archaean age rocks to the possibilities of extraterrestrial life. This volume discusses the extremophiles living in harsh environments (from our anthropocentric point) and describes them in considerable detail. Some chapters also review topics such as symbiosis, bacterial luminescence, methanogens, and petroleum-grown cells. The final chapters of this book shed new light on astrobiology and speculate on extremophiles as candidates for extraterrestrial life. All chapters are updated to the latest research level. |
| molecular microbial ecology manual: Sustainable Approaches to Controlling Plant Pathogenic Bacteria V. Rajesh Kannan, Kubilay Kurtulus Bastas, 2015-09-08 Plant diseases and changes in existing pathogens remain a constant threat to our forests, food, and fiber crops as well as landscape plants. However, many economically important pathosystems are largely unexplored and biologically relevant life stages of familiar systems remain poorly understood. In a multifaceted approach to plant pathogenic behav |
| molecular microbial ecology manual: Harmonisation of Regulatory Oversight in Biotechnology Biosafety and the Environmental Uses of Micro-Organisms Conference Proceedings OECD, 2015-01-22 These proceedings discuss the use of micro-organisms in agriculture and for production purposes such as bio-fuel, their use for bioremediation and in cleaning products, the environmental applications of insects, and environmental risk/safety assessment considerations. |
| molecular microbial ecology manual: Environmental Microbiology Jared Leadbetter, 2005-10-18 Environmental Microbiology covers cultivation of diverse microbes, physiological ecology and nucleic acid techniques in environmental microbiology. Both applied methods (such as cultivation and preparation) and theoretical modeling (such as bioenergetic calculation programs and imaging) are discussed. A significant number of chapters on methods in activity measurement are included. Environmental Microbiology is volume 397 in the critically acclaimed laboratory standard for more than forty years, Methods in Enzymology. Methods in Enzymology is now available online at ScienceDirect - full-text online of volumes 1 onwards. · Cultivation & Physiological Ecology · Imaging of Cells & Microscale Architecture · Nucleic Acids-based Molecular Ecology |
| molecular microbial ecology manual: Nucleic Acids in the Environment Jack T. Trevors, J.Dick van Elsas, 2013-03-07 Molecular biological techniques such as DNA/RNA extraction and purification, and especially the polymerase chain reaction, PCR, are rapidly gaining interest also in related fields, such as microbiology or environmental sciences. They offer new approaches and opportunities for the determination of microbial cells, DNA and RNA from soils, roots, rhizospheres, sediments and aquatic environments. Detailed protocols for these applications are described in this manual. |
| molecular microbial ecology manual: Integrated Assessment of Ecosystem Health K.M. Scow, Graham E. Fogg, David E. Hinton, Michael L. Johnson, 2019-09-17 The new approach to ecosystem health is proactive. As a result, the scope of environmental studies is growing and the methods are evolving. Integrated Assessment of Ecosystem Health aggressively broadens the range of ecotoxicology to include its related fields. The book begins with John Cairns, Jr.'s predictions and recommendations for the futur |
| molecular microbial ecology manual: Plant-Bacteria Interactions Iqbal Ahmad, John Pichtel, Shamsul Hayat, 2008-09-08 Here, an extremely experienced team of authors from five different continents provides a timely review of progress in the use and exploitation of soil bacteria to improve crop and plant growth. They present novel ideas on how to grow better, more successful crops, in an environmentally sound way, making this invaluable reading for those working in the pharmaceutical, biotechnological and agricultural industries. |
| molecular microbial ecology manual: Rhizomicrobiome in Sustainable Agriculture and Environment Joginder Singh Panwar, Vikas Sharma, 2024-10-18 Rhizomicrobiome: Current Status and Future Prospects for Agriculture and Environment explores the important potential of biocontrol agents in the reduction of overexploitation of synthetic pesticides, enhancing crop production, and maintaining the natural texture and health of agricultural soils. As concerns about sustainable production challenge current practices, this book presents opportunities for utilizing biological systems as part of the solution. Rhizomicrobiome is a significant part of plant biological system which impacts the plant growth and survival in different physiological conditions. Its composition includes different microbial networks whose presence is mainly impacted by the root exudates. Archaea, bacteria, protozoa, fungi, oomycetes, nematodes, microarthropods etc. are the significant parts of the rhizomicrobiome. Rhizomicrobiome could be that novel ecosystem housing the bioinoculants that can help create sustainable, productive growth environments. Written by a team of global experts Rhizomicrobiome explores the full range of rhizomicrobiome topics including sustainable agriculture, food security, and environmental management and will be a valuable resource for researchers, academics and advanced students. - Introduces the latest advancement in the sustainable agricultural practices, microbial biocontrol, and environmental management - Presents the prospects of, wide applications of, traditional uses of, and modern practices of harnessing the potential of rhizomicrobiome - Includes informative illustrations of recent trends of phyto and soil microbiome |
| molecular microbial ecology manual: The Biology of Coral Reefs Charles R. C. Sheppard, Simon K. Davy, Graham M. Pilling, 2009-06-25 Coral reefs represent the most spectacular and diverse marine ecosystem on the planet as well as a critical source of income for millions of people. However, the combined effects of human activity have led to a rapid decline in the health of reefs worldwide, with many now facing complete destruction. This timely book provides an integrated overview of the function, physiology, ecology, and behaviour of coral reef organisms. Each chapter is enriched with a selection of 'boxes' on specific aspects written by internationally recognised experts. As with other books in the Biology of Habitats Series, the emphasis in this book is on the organisms that dominate this marine environment although pollution, conservation, climate change, and experimental aspects are also included. Indeed, particular emphasis is placed on conservation and management due to the habitat's critically endangered status. A global range of examples is employed which gives the book international relevance. This accessible text is intended for students, naturalists and professionals and assumes no previous knowledge of coral reef biology. It is particularly suitable for both senior undergraduate and graduate students (in departments of biology, geography, and environmental science) taking courses in coral reef ecology, marine biology, oceanography and conservation biology, as well as the many professional ecologists and conservation biologists requiring a concise overview of the topic. It will also be of relevance and use to reef managers, recreational divers, and amateur naturalists. |
| molecular microbial ecology manual: Laboratory Methods for Soil Health Analysis (Soil Health series, Volume 2) Douglas L. Karlen, Diane E. Stott, Maysoon M. Mikha, 2021-08-17 Laboratory Methods for Soil Health Analysis Analyzing, comparing, and understanding soil health data The maintenance of healthy soil resources is instrumental to the success of an array of global efforts and initiatives. Whether they are working to combat food shortages, conserve our ecosystems, or mitigate the impact of climate change, researchers and agriculturalists the world over must be able to correctly examine and understand the complex nature of this essential resource. These new volumes have been designed to meet this need, addressing the many dimensions of soil health analysis in chapters that are concise, accessible and applicable to the tasks at hand. Soil Health, Volume Two: Laboratory Methods for Soil Health Analysis provides explanations of the best practices by which one may arrive at valuable, comparable data and incisive conclusions, and covers topics including: Sampling considerations and field evaluations Assessment and interpretation of soil-test biological activity Macro- and micronutrients in soil quality and health PLFA and EL-FAME indicators Offering a practical guide to collecting and understanding soil health data, this volume will be of great interest to all those working in agriculture, private sector businesses, non-governmental organizations (NGOs), academic-, state-, and federal-research projects, as well as state and federal soil conservation, water quality and other environmental programs. |
| molecular microbial ecology manual: Encyclopedia of Marine Biotechnology Se-Kwon Kim, 2020-08-14 A keystone reference that presents both up-to-date research and the far-reaching applications of marine biotechnology Featuring contributions from 100 international experts in the field, this five-volume encyclopedia provides comprehensive coverage of topics in marine biotechnology. It starts with the history of the field and delivers a complete overview of marine biotechnology. It then offers information on marine organisms, bioprocess techniques, marine natural products, biomaterials, bioenergy, and algal biotechnology. The encyclopedia also covers marine food and biotechnology applications in areas such as pharmaceuticals, cosmeceuticals, and nutraceuticals. Each topic in Encyclopedia of Marine Biotechnology is followed by 10-30 subtopics. The reference looks at algae cosmetics, drugs, and fertilizers; biodiversity; chitins and chitosans; aeroplysinin-1, toluquinol, astaxanthin, and fucoxanthin; and algal and fish genomics. It examines neuro-protective compounds from marine microorganisms; potential uses and medical management of neurotoxic phycotoxins; and the role of metagenomics in exploring marine microbiomes. Other sections fully explore marine microbiology, pharmaceutical development, seafood science, and the new biotechnology tools that are being used in the field today. One of the first encyclopedic books to cater to experts in marine biotechnology Brings together a diverse range of research on marine biotechnology to bridge the gap between scientific research and the industrial arena Offers clear explanations accompanied by color illustrations of the techniques and applications discussed Contains studies of the applications of marine biotechnology in the field of biomedical sciences Edited by an experienced author with contributions from internationally recognized experts from around the globe Encyclopedia of Marine Biotechnology is a must-have resource for researchers, scientists, and marine biologists in the industry, as well as for students at the postgraduate and graduate level. It will also benefit companies focusing on marine biotechnology, pharmaceutical and biotechnology, and bioenergy. |
| molecular microbial ecology manual: The Handbook of Plant Functional Genomics Guenter Kahl, Khalid Meksem, 2008-09-08 In this incisive, concise overview of this booming field, the editors -- two of the leading figures in the field with a proven track record -- combine their expertise to provide an invaluable reference on the topic. Following a treatment of transcriptome analysis, the book goes on to discuss replacement and mutation analysis, gene silencing and computational analysis. The whole is rounded off with a look at emerging technologies. Each chapter is accompanied by a concise overview, helping readers to quickly identify topics of interest, while important, carefully selected words and concepts are explained in a handy glossary. Equally accessible to both experienced scientists and newcomers to the field. |
| molecular microbial ecology manual: Using the Biological Literature Diane Schmidt, 2014-04-14 The biological sciences cover a broad array of literature types, from younger fields like molecular biology with its reliance on recent journal articles, genomic databases, and protocol manuals to classic fields such as taxonomy with its scattered literature found in monographs and journals from the past three centuries. Using the Biological Literature: A Practical Guide, Fourth Edition is an annotated guide to selected resources in the biological sciences, presenting a wide-ranging list of important sources. This completely revised edition contains numerous new resources and descriptions of all entries including textbooks. The guide emphasizes current materials in the English language and includes retrospective references for historical perspective and to provide access to the taxonomic literature. It covers both print and electronic resources including monographs, journals, databases, indexes and abstracting tools, websites, and associations—providing users with listings of authoritative informational resources of both classical and recently published works. With chapters devoted to each of the main fields in the basic biological sciences, this book offers a guide to the best and most up-to-date resources in biology. It is appropriate for anyone interested in searching the biological literature, from undergraduate students to faculty, researchers, and librarians. The guide includes a supplementary website dedicated to keeping URLs of electronic and web-based resources up to date, a popular feature continued from the third edition. |
| molecular microbial ecology manual: The future of DNA J. Wirz, E.T. Lammerts van Bueren, 2012-12-06 The rapid progress in biological and biomedical sciences in the last twenty years has brought with it an extensive development of the methods of molecular genetics. This has had impacts on society in many fields. Practical applications in medicine, pharmacology, agriculture, food design and biotechnology are firmly established and will grow enormously in the years to come. The scientific views of DNA and genes which underpin these applications are challenging our fundamental concepts of life, nature, society and humanity. It is beyond doubt that these developments need to be evaluated and reflected upon, both from a scientific and philosophical point of view, as well as from a cultural and social perspective. This book provides a wide range of discussions about the effects of DNA thinking in science and society, in biology and in relation to what it is to be human. Insights are provided into trans-disciplinary approaches and divergent views are compared. The reports on the plenary discussions and the many workshops show progress towards a power-free dialogue, i.e. an exchange of thoughts, free of economic and political pressure. The viewpoints of a variety of specialists, including scientists (microbiologists, molecular geneticists and clinical researchers), clinicians, philosophers and members of NGOs are presented. The contents will be of particular interest to those involved in genetic engineering, from students to policy makers, who face the challenge of the new technology in their work and who are looking for a substantial expansion and complementation of their basis for judgement forming. |
Molecule - Wikipedia
In molecular sciences, a molecule consists of a stable system (bound state) composed of two or more atoms. Polyatomic ions may sometimes be usefully thought of as electrically charged …
MOLECULAR Definition & Meaning - Merriam-Webster
The meaning of MOLECULAR is of, relating to, consisting of, or produced by molecules. How to use molecular in a sentence.
Molecules | An Open Access Journal from MDPI
Jun 5, 2012 · Molecules is the leading international, peer-reviewed, open access journal of chemistry. Molecules is published semimonthly online by MDPI.
MOLECULAR Definition & Meaning - Dictionary.com
Molecular definition: of or relating to or caused by molecules.. See examples of MOLECULAR used in a sentence.
MOLECULAR | English meaning - Cambridge Dictionary
MOLECULAR definition: 1. relating to molecules (= the simplest units of a chemical substance): 2. relating to molecules…. Learn more.
Molecule | Definition, Examples, Structures, & Facts | Britannica
Apr 21, 2025 · What is a molecule in chemistry? How are atoms related to molecules? What are the different types of molecules based on their composition? How do molecules form chemical …
MOLECULAR definition and meaning | Collins English Dictionary
2 meanings: 1. of or relating to molecules 2. logic (of a sentence, formula, etc) capable of analysis into atomic formulae of.... Click for more definitions.
Molecular | definition of molecular by Medical dictionary
of, pertaining to, or composed of molecules. molecular disease any disease in which the pathogenesis can be traced to a single chemical substance, usually a protein, which is either …
molecular adjective - Definition, pictures, pronunciation and …
Definition of molecular adjective in Oxford Advanced Learner's Dictionary. Meaning, pronunciation, picture, example sentences, grammar, usage notes, synonyms and more.
Molecular Compounds - Definition, Examples, Properties, How to …
Jul 25, 2024 · Molecular compounds are substances formed when two or more atoms join together through chemical bonds. These atoms can be from the same element, like oxygen …
Molecule - Wikipedia
In molecular sciences, a molecule consists of a stable system (bound state) composed of two or more atoms. Polyatomic ions may sometimes be usefully thought of as electrically charged …
MOLECULAR Definition & Meaning - Merriam-Webster
The meaning of MOLECULAR is of, relating to, consisting of, or produced by molecules. How to use molecular in a sentence.
Molecules | An Open Access Journal from MDPI
Jun 5, 2012 · Molecules is the leading international, peer-reviewed, open access journal of chemistry. Molecules is published semimonthly online by MDPI.
MOLECULAR Definition & Meaning - Dictionary.com
Molecular definition: of or relating to or caused by molecules.. See examples of MOLECULAR used in a sentence.
MOLECULAR | English meaning - Cambridge Dictionary
MOLECULAR definition: 1. relating to molecules (= the simplest units of a chemical substance): 2. relating to molecules…. Learn more.
Molecule | Definition, Examples, Structures, & Facts | Britannica
Apr 21, 2025 · What is a molecule in chemistry? How are atoms related to molecules? What are the different types of molecules based on their composition? How do molecules form chemical …
MOLECULAR definition and meaning | Collins English Dictionary
2 meanings: 1. of or relating to molecules 2. logic (of a sentence, formula, etc) capable of analysis into atomic formulae of.... Click for more definitions.
Molecular | definition of molecular by Medical dictionary
of, pertaining to, or composed of molecules. molecular disease any disease in which the pathogenesis can be traced to a single chemical substance, usually a protein, which is either …
molecular adjective - Definition, pictures, pronunciation and …
Definition of molecular adjective in Oxford Advanced Learner's Dictionary. Meaning, pronunciation, picture, example sentences, grammar, usage notes, synonyms and more.
Molecular Compounds - Definition, Examples, Properties, How to …
Jul 25, 2024 · Molecular compounds are substances formed when two or more atoms join together through chemical bonds. These atoms can be from the same element, like oxygen …
